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Repository
brainvisa-4.5
closed
15/09/2015
100%
137 issues
(
137 closed
— 0 open)
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Issues by
Tracker
Status
Priority
Author
Assignee
Category
Defect
110/110
Feature
9/9
Task
14/14
Request
4/4
Related issues
brainvisa-morphologist -
Defect #2515
: Pb of SVM under Windows
Actions
brainvisa-axon -
Defect #4303
: RuntimeError: underlying C/C++ object has been deleted: when unlock/lock a specific parameter
Actions
brainvisa-development -
Defect #4842
: Cannot compile BrainVISA projects on CentOS 6.2
Actions
brainvisa-development -
Defect #5093
: Qt style GTK+ make applications crash on some systems
Actions
brainvisa-soma -
Defect #5142
: Soma-workflow: Authentification with login/password
Actions
brainvisa-axon -
Defect #6870
: Windows : axon systematically exit with segmentation fault
Actions
brainvisa-anatomist -
Defect #6928
: L/R/A/P... markers do not follow window referential info
Actions
Defect #7406
: Packaging Mandriva 2008 64bits Brainvisa 4.4.0: unable to load QMYSQL driver
Actions
brainvisa-axon -
Defect #7707
: default values in GUI are not correct
Actions
brainvisa-axon -
Defect #7718
: database settings sometimes reset to default values
Actions
brainvisa-axon -
Defect #7962
: bvproc with iteration are no longer read in 4.4.0
Actions
brainvisa-development -
Defect #8105
: DCMTK detection fails on CentOS
Actions
brainvisa-axon -
Defect #8111
: BrainVISA does no longer work in batch mode
Actions
brainvisa-axon -
Defect #8269
: reload toolboxes break viewers, editors and converters
Actions
brainvisa-axon -
Defect #8289
: history_book is sometimes not created
Actions
brainvisa-soma -
Defect #8394
: Error while updating job status
Actions
Defect #8398
: Windows : ipython does not starts correctly
Actions
brainvisa-aims -
Defect #8705
: AimsThreshold on Analyse images causes the output referential to be different from the input one.
Actions
brainvisa-anatomist -
Defect #8717
: Windows 7 : anatomist sometimes fails to load python plugins at launch
Actions
brainvisa-nuclear_imaging -
Defect #10105
: Clean types and hierarchies in Nuclear Imaging toolbox
Actions
brainvisa-development -
Defect #10378
: python packaging on Ubuntu 12.04 semi-hard-coded paths
Actions
brainvisa-development -
Defect #10403
: hard-coded python executable path in ipython script for Mac
Actions
brainvisa-nuclear_imaging -
Defect #10555
: Problem whith white mask in the intersect ROI mask whith grey/white mask (MNI space) pipeline
Actions
brainvisa-aims -
Defect #10628
: Add border management in FilteringImageAlgorithm
Actions
brainvisa-anatomist -
Defect #10635
: ipython does not start correctly on Ubuntu 14.04
Actions
brainvisa-axon -
Defect #10752
: ipython issue with ipython 1.2 (Ubuntu 14.04)
Actions
brainvisa-aims -
Defect #10820
: AIMS settings are not passed to soma IO
Actions
brainvisa-aims -
Defect #11289
: [CentOS 5.10] SIGABRT on soma.aims exit
Actions
brainvisa-aims -
Defect #11293
: AimsStructuringElement_test failure
Actions
brainvisa-development -
Defect #11536
: Windows : matplotlib import sometimes fail
Actions
brainvisa-development -
Defect #12343
: Build fails generating bv_minf_2_XML
Actions
brainvisa-development -
Defect #12401
: bv_maker sources may fail with git projects on Ubuntu 10.04
Actions
brainvisa-soma -
Defect #12503
: Issue with somadicom plugin on CentOS and Mandriva 2008
Actions
brainvisa-development -
Defect #12504
: Install DCMTK as shared library on systems that have static libraries
Actions
brainvisa-morphologist -
Defect #12567
: The pial mesh is offset by one voxel at the top of gyri
Actions
brainvisa-aims -
Defect #12595
: Minf is not read for *.tif images (with one F)
Actions
brainvisa-soma -
Defect #12644
: jobs status out of sync with workflow after interruption
Actions
brainvisa-aims -
Defect #12868
: heap-use-after-free in pyaims (related to reference counting)
Actions
brainvisa-soma -
Defect #12893
: Window7: somadicom plugin build fail
Actions
brainvisa-anatomist -
Defect #12952
: GraphReader: segfault when ROI has a name that contains accent
Actions
brainvisa-development -
Defect #13016
: Sourcing bv_env.sh without directory doesn't work anymore
Actions
brainvisa-axon -
Defect #13036
: missing type 'Transform Softmean to MNI'
Actions
brainvisa-axon -
Defect #13060
: update databases process never deleted
Actions
Defect #13061
: loading types do not detect duplicate defs any longer
Actions
brainvisa-morphologist -
Defect #13066
: morphologist-ui "erase results" doesn't erase transformations
Actions
brainvisa-morphologist -
Defect #13067
: morphologist-ui should warn about spam models installation
Actions
brainvisa-morphologist -
Defect #13079
: morphologist-ui: mixup between subjects
Actions
brainvisa-aims -
Defect #13081
: AIMS depends on brainvisa-share for the definition of graph files (.arg)
Actions
brainvisa-anatomist -
Defect #13084
: Anatomist cannot find graph syntax files in their new location
Actions
brainvisa-morphologist -
Defect #13104
: morphologist-ui: imperfect data clear when stopping workflow
Actions
brainvisa-soma -
Defect #13125
: soma-workflow tests still randomly fail
Actions
brainvisa-soma -
Defect #13126
: soma-workflow tests leave some database files in /tmp
Actions
brainvisa-morphologist -
Defect #13154
: morphologist-ui import study, changing files formats
Actions
brainvisa-morphologist -
Defect #13158
: Bias correction view: use histo analysis
Actions
brainvisa-morphologist -
Defect #13160
: morphologist-ui: processing settings are disabled
Actions
brainvisa-aims -
Defect #13187
: DICOM plugins are not loaded on Mac
Actions
brainvisa-anatomist -
Defect #13378
: anatomist socket mode is broken
Actions
brainvisa-anatomist -
Defect #13407
: Windows 7: anatomist fails to close properly
Actions
brainvisa-anatomist -
Defect #13410
: anatomist Fusion3D transformations are broken
Actions
brainvisa-axon -
Defect #13432
: Ubuntu 14.04 LTS: Importing some modules of scikit learn from brainvisa process raises segfault
Actions
brainvisa-axon -
Defect #13499
: parameters link on Boolean parameters doesn't work
Actions
brainvisa-aims -
Defect #13509
: AimsZCat on meshes takes only the first timestep
Actions
brainvisa-aims -
Defect #13510
: MeshInterpoler time issues
Actions
brainvisa-axon -
Defect #13555
: parameter links on Choice don't work properly
Actions
brainvisa-axon -
Defect #13556
: parameters links on OpenChoice dopesn't work
Actions
brainvisa-anatomist -
Defect #13570
: Anatomist crashes when a volume contains extreme values
Actions
brainvisa-soma -
Defect #13575
: nifti scale factors with large float values are broken
Actions
brainvisa-anatomist -
Defect #13582
: Anatomist colormap is broken when a volume contains extreme values
Actions
brainvisa-soma -
Defect #13596
: Controllers GUI do not handle correctly Undefined values, and do not reset invalid values
Actions
brainvisa-morphologist -
Defect #13597
: FOM bugs in morphologist
Actions
brainvisa-soma -
Defect #13611
: Incoherent voxel sizes can be written in .minf and NIfTI header
Actions
brainvisa-axon -
Defect #13639
: findValue sometimes uses default attributes values when it should not
Actions
brainvisa-soma -
Defect #13669
: NIFTI-2 IO are broken
Actions
brainvisa-aims -
Defect #13843
: MINC reader leaves 2 open files
Actions
brainvisa-soma -
Defect #13844
: somanifti partial reading leaves open file
Actions
brainvisa-aims -
Defect #13860
: Inversion bugs in Quaternion
Actions
brainvisa-aims -
Defect #13887
: aims::Reader frame reading only reads one slice
Actions
brainvisa-axon -
Defect #13904
: FreeSurfer commands do not use the correct env
Actions
brainvisa-development -
Defect #13991
: missing packages and dependencies in Ubuntu 12.04 packaging
Actions
brainvisa-development -
Defect #14093
: missing lib in packages: libbz2
Actions
brainvisa-morphologist -
Defect #14094
: missing dependency: capsul
Actions
brainvisa-development -
Defect #14146
: Mac binaries look for Qt as frameworks, not dylibs
Actions
brainvisa-development -
Defect #14147
: Mac: python looks for X11 and the system requests to install it
Actions
brainvisa-development -
Defect #14161
: Mac scripts dont set path variables
Actions
brainvisa-development -
Defect #14162
: Mac: libz.1.dylib should not be packaged
Actions
brainvisa-aims -
Defect #14327
: pyaims: Object == Object is not working
Actions
brainvisa-aims -
Defect #14357
: fix python bindings for voume<int> * float
Actions
brainvisa-aims -
Defect #14363
: partial writing of volumes (using soma-io) is broken
Actions
brainvisa-anatomist -
Defect #14417
: Inverted palettes on volumes are broken
Actions
brainvisa-soma -
Defect #14428
: soma.minf depends on Axon...
Actions
brainvisa-soma -
Defect #14429
: DataSourceInfo.check() sould support multiple extensions
Actions
brainvisa-axon -
Defect #14434
: Bad lastIncrementalUpdate value
Actions
brainvisa-data_storage_client -
Defect #14570
: data_storage_client is using modules from brainvisa-cmake
Actions
brainvisa-anatomist -
Defect #14641
: fusion2Dmesh transformation issue
Actions
brainvisa-aims -
Defect #14680
: Varying value in FoldGraphAttributes
Actions
brainvisa-aims -
Defect #14681
: Data corrution in AimsFoldGraphAttributes
Actions
brainvisa-morphologist -
Defect #14699
: context._setArguments does not correctly propagate parameters values
Actions
brainvisa-axon -
Defect #14743
: parameters links not triggered at dynamic nodes creation
Actions
brainvisa-soma -
Defect #14750
: wrong workflow status
Actions
brainvisa-aims -
Defect #14758
: Partial volume read with borders introduces shift in resulting volume
Actions
brainvisa-anatomist -
Defect #15025
: Anatomist crashes when compiled with new SIP/PyQt
Actions
brainvisa-anatomist -
Defect #15515
: ATexture::clone() doesn't preserve the data type
Actions
brainvisa-development -
Defect #15599
: missing dependency libgstapp in the Ubuntu 12 (glibc15) binary package
Actions
brainvisa-aims -
Defect #15908
: Ugly import in aggregator.py
Actions
brainvisa-soma -
Defect #16008
: fdinhibitor has side effects on higher-level streams
Actions
brainvisa-development -
Defect #16111
: packaging of HDF5 dependencies on Ubuntu 12 implies extra dependencies
Actions
brainvisa-development -
Defect #16120
: on ubuntu, libnetcdf has many many dependencies
Actions
brainvisa-development -
Defect #16191
: python nams in test_pack on Mac
Actions
brainvisa-anatomist -
Defect #16422
: texture colormap problem
Actions
brainvisa-development -
Defect #17054
: thirdparty dependencies are wrong the first time a build tree is configured
Actions
brainvisa-development -
Feature #4373
: Add clean target for generated command
Actions
brainvisa-cortical_surface -
Feature #4887
: Add a common referential to "scanner-based anatomical coordinates" for freesurfer data
Actions
brainvisa-aims -
Feature #8022
: Adapt AimsOverVolume to use partial io capabilities
Actions
brainvisa-axon -
Feature #8954
: Add JSON support for DiskItem
Actions
brainvisa-axon -
Feature #9165
: Handle ROI images in the tranformation tool
Actions
brainvisa-nuclear_imaging -
Feature #9285
: Check the MRI register in pet space
Actions
brainvisa-development -
Feature #9425
: Change BrainVISA branching policy in Subversion
Actions
brainvisa-nuclear_imaging -
Feature #10601
: Add image type in Group Creation/Modification pipeline
Actions
brainvisa-soma -
Feature #14556
: allow to disconnect a resource from Soma-Workflow GUI
Actions
brainvisa-morphologist -
Task #2974
: reference / upload the spam sulci atlas on nitrc.org
Actions
brainvisa-axon -
Task #7297
: Replace soma.wip.application by soma.application
Actions
brainvisa-nuclear_imaging -
Task #10228
: A new tool for optimize data management
Actions
brainvisa-aims -
Task #11926
: AimsSubSampling: Add output format option
Actions
brainvisa-development -
Task #12862
: Windows 7: Nightly build does not end when a segmentation fault occurs because debugging popup are opened
Actions
brainvisa-anatomist -
Task #12871
: check or writ doc about properties in .minf files for objects
Actions
brainvisa-morphologist -
Task #13103
: bridge axon config and capsul config (for SPM setup especially)
Actions
brainvisa-morphologist -
Task #13114
: morphologist-ui: reorganize settings GUI
Actions
brainvisa-morphologist -
Task #13155
: morphologist-ui: improve specific view for graphs
Actions
brainvisa-morphologist -
Task #13156
: morphologist-ui: improve specific view for mesh
Actions
brainvisa-morphologist -
Task #13157
: morphologist-ui: do the files polling in a different thread
Actions
brainvisa-anatomist -
Task #13464
: Deactivate PyQt4 plugin load in binary packages to avoid potential binary incompatibilities
Actions
brainvisa-aims -
Task #14305
: Overloaded operators and helper functions in cartodata volumes
Actions
brainvisa-development -
Task #14576
: Add the possibility to install brainvisa pack from commande line
Actions
brainvisa-axon -
Request #5136
: new role for processes : "unittest"
Actions
brainvisa-axon -
Request #5487
: Add an option to dispay tips
Actions
brainvisa-development -
Request #5669
: Remove component list from brainvisa-cmake
Actions
brainvisa-development -
Request #13482
: Consider reverting to BRAINVISA_PACKAGING_THIRDPARTY=OFF by default
Actions
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